DueyDrop Taxonomic Analysis

Taxonomic analysis of sc-RNAseq libraries

15 December 2015

Bulk Libraries

Analysis of standard bulk transcriptome libraries sequenced on a GeneAnalyzer II with 76bp paired-end reads.

Bulk1: full and subsample visualisations

Bulk2: full and subsample visualisations

Included SCT Libraries

Summary of the taxonomic state of the single cell (MDA based) libraries that were passed DueyDrop screening. All SCT libraries were sequenced using 150bp paired-end reads on a HiSeq 2500.

Light1-9: full and subsample visualisations

Light1-10: full and subsample visualisations

Light1-11: full and subsample visualisations

Dark1-2: full and subsample visualisations

Dark2-3: full and subsample visualisations

Dark2-6: full and subsample visualisations

Dark2-7: full and subsample visualisations

Dark2-8: full and subsample visualisations

Excluded SCT Libraries

Summary of the SCT libraries that failed taxonomic screening.

Dark1-3: full and subsample visualisations

Dark1-5: full and subsample visualisations

Dark2-2: full and subsample visualisations


Bioinformatics Postdoctoral Fellow @ Dalhousie University. Interests: Machine Learning, Science, Programming